1KITE Database

Description

Info

Species:

Bibio marci

Lib_identifier:

INSbusTBCRABPEI-135

Individuals:

N/A

Stage:

Sex:

Project:

1KITE Project

Subproject:

Proj_100list

Submitter:

Ralph Peters

Preservation Method:

Collection Records

Country:

State / Prefecture / Canton / Province:

District / County:

City / National Park / Area:

Institution / University:

Locality comments (Borough / Address, further details):

Latitude:

Longitude:

Altitude (m):

Labstock / Shop:

Labstock comments:

Collecting Date (from):

Collecting Date (to):

Collecting Date (discontiguous):

Collector:

Determined by:

Organ/Tissue

Brief Process

Identifier_bgi:

011046362

rna_identifier:

011051784

Vial_tag:

Bibio marci

Arrived_date:

2011-05-18

Rna_ext_begin_date:

2011-05-19

Rna_ext_result:

Lib_const_begin_date:

2011-06-1

Lib_const_result:

Seq_begin_date:

2011-07-13

Seq_finished_date:

2011-09-1

Asm_begin_date:

2011-09-13

Asm_finished_date:

2011-10-1

Transport:

Proj_100list:

Extra_note:

Map More Detail

Methods

RNA Extractions

Report

  Report No.:

TSZe11051901

  Tube No.:

1

  Concentrantion(ng/uL):

910

  Volume(ul):

45.0000

  Total Mass(ug):

40.95

  RIN:

8.2

  28S/18S:

0.0

  Library Type:

  Test Result:

Qualified

  Remark:

  Peak:

Usage
- Total Volume.:
- Remaining:
Sequencing

Library Construction

Library Process

  Filling Date:

2011-07-19

  Operator:

余越、艾洁、邹婷

  QC Result:

合格

  QPCR(concentration):

14.09

  2100 Result:

合格

  Fragment Length(bp):

246

  Library Submit Date:

2011-07-19

  Pooling Date:

  Remarks:

Usage
- Total Volume.:
- Remaining:
Transcriptome Sequencing:

Raw Data
  Library:

INSbusTBCRABPEI-135

  Library_full_ID:

110817_I809_FCD05CDACXX_L3_INSbusTBCRABPEI-135

  RawClusters:

3631515

  PFclusters:

3373949

  % PF:

92.9

  FirstCyclelnt:

  TotalReads:

8560159

  TotalBases:

2568047700

  Length:

150;150

  %Phasing:

0.159;0.145

  %Prephasing:

0.221;0.241

  %Q20:

92.97;91.78

  %Q30:

87.03;85.06

  %GC:

43.34;43.33

  %ErrorRate:

  %Align:

90.97;96.78

  %UniqPair:
  InsertSize:

104

  InsertSizeSD:

  %index0mismatch:

97.7

  %index1mismatch:

2
- %base.png:
- qual.png:
Statistics of Filtering

  Library_full_ID:

110817_I809_FCD05CDACXX_L3_INSbusTBCRABPEI-135

  total_zise:

2568047700

  low_quality:

98929050

  N-num Size:

356550

  is_adapter:

9712350

  duplication:

0

  output_size:

2380624200

  single_size:

78425550

Raw Data
  Library:

INSbusTBCRABPEI-135

  Library_full_ID:

110724_I224_FCD0490ACXX_L8_INSbusTBCRABPEI-135

  RawClusters:

1244641

  PFclusters:

1214364

  % PF:

97.6

  FirstCyclelnt:

  TotalReads:

2947132

  TotalBases:

884139600

  Length:

150;150

  %Phasing:

0.307;0.221

  %Prephasing:

0.399;0.428

  %Q20:

88.22;79.16

  %Q30:

79.95;70.83

  %GC:

43.80;43.97

  %ErrorRate:

  %Align:

97.81;96.65

  %UniqPair:
  InsertSize:

104

  InsertSizeSD:

  %index0mismatch:

98.2

  %index1mismatch:

1.5
- %base.png:
- qual.png:
Statistics of Filtering

  Library_full_ID:

110724_I224_FCD0490ACXX_L8_INSbusTBCRABPEI-135

  total_zise:

884139600

  low_quality:

62580900

  N-num Size:

126150

  is_adapter:

3018450

  duplication:

0

  output_size:

767004600

  single_size:

51409500

Raw Data

Search More Data Application download permissions Download selected data Selected data citation

Download Select	Data ID	File Name	Data Type	Data Format	Data Size	Release Date	Authorization

Data

Result Data

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Download Select	Data ID	File Name	Data Type	Data Format	Data Size	Release Date	Authorization

Genes

Phylogenetic Analysis

Gene Name	Refer DB	Length	Tools

Literatures

1. Phylogenomics resolves the timing and pattern of insect evolution

2. Response to Comment on “Phylogenomics resolves the timing and pattern of insect evolution.”

011046362

Info

Collection Records

Organ/Tissue

Brief Process

Map More Detail

RNA Extractions

Report

Usage

Sequencing

Library Construction

Library Process

Usage

Transcriptome Sequencing:

Raw Data

Statistics of Filtering

Raw Data

Statistics of Filtering

Raw Data

Result Data

Phylogenetic Analysis

1. Phylogenomics resolves the timing and pattern of insect evolution

2. Response to Comment on “Phylogenomics resolves the timing and pattern of insect evolution.”

Links

Database List

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