1KITE Database

Description

Info

Species:

Notostira elongata

Lib_identifier:

INShauTAPRAAPEI-9

Individuals:

N/A

Stage:

Sex:

Project:

1KITE Project

Subproject:

Proj_100list

Submitter:

Ralph Peters

Preservation Method:

Collection Records

Country:

State / Prefecture / Canton / Province:

District / County:

City / National Park / Area:

Institution / University:

Locality comments (Borough / Address, further details):

Latitude:

Longitude:

Altitude (m):

Labstock / Shop:

Labstock comments:

Collecting Date (from):

Collecting Date (to):

Collecting Date (discontiguous):

Collector:

Determined by:

Organ/Tissue

Brief Process

Identifier_bgi:

T011091215

rna_identifier:

SZYR11100111_A

Vial_tag:

2.17_Noel

Arrived_date:

2011-09-29

Rna_ext_begin_date:

2011-10-10

Rna_ext_result:

Lib_const_begin_date:

2011-10-20

Lib_const_result:

Seq_begin_date:

2011-11-25

Seq_finished_date:

2011-12-21

Asm_begin_date:

2011-12-21

Asm_finished_date:

2011-12-26

Transport:

Proj_100list:

Extra_note:

Map More Detail

Methods

RNA Extractions

Report

  Report No.:

TSZe11101704

  Tube No.:

1

  Concentrantion(ng/uL):

1053.0

  Volume(ul):

30.0000

  Total Mass(ug):

31.59

  RIN:

6.3

  28S/18S:

0.0

  Library Type:

  Test Result:

Qualified

  Remark:

  Peak:

Usage
- Total Volume.:
- Remaining:
Sequencing

Library Construction

Library Process

  Filling Date:

2011-11-17

  Operator:

王旭阳、梁丽丝、李娟娟、郑邦烈

  QC Result:

合格

  QPCR(concentration):

94.61

  2100 Result:

合格

  Fragment Length(bp):

229

  Library Submit Date:

2011-11-19

  Pooling Date:

  Remarks:

Usage
- Total Volume.: 15.0000
- Remaining: 11.94
Transcriptome Sequencing:

Raw Data
  Library:

INShauTAPRAAPEI-9

  Library_full_ID:

111126_I883_FCD0GUKACXX_L6_INShauTAPRAAPEI-9

  RawClusters:

4385093

  PFclusters:

3933966

  % PF:

90.0

  FirstCyclelnt:

  TotalReads:

12021110

  TotalBases:

3606333000

  Length:

150;150

  %Phasing:

0.138;0.119

  %Prephasing:

0.158;0.159

  %Q20:

91.77;88.93

  %Q30:

81.94;79.15

  %GC:

44.60;44.59

  %ErrorRate:

  %Align:

  %UniqPair:
  InsertSize:

  InsertSizeSD:

  %index0mismatch:

99

  %index1mismatch:

0.9
- %base.png:
- qual.png:
Statistics of Filtering

  Library_full_ID:

111126_I883_FCD0GUKACXX_L6_INShauTAPRAAPEI-9

  total_zise:

3606333000

  low_quality:

258574200

  N-num Size:

749850

  is_adapter:

18705150

  duplication:

0

  output_size:

3160728900

  single_size:

167574900

Raw Data

Search More Data Application download permissions Download selected data Selected data citation

Download Select	Data ID	File Name	Data Type	Data Format	Data Size	Release Date	Authorization

Data

Result Data

Search More Data Application download permissions Download selected data Selected data citation

Download Select	Data ID	File Name	Data Type	Data Format	Data Size	Release Date	Authorization

Genes

Phylogenetic Analysis

Gene Name	Refer DB	Length	Tools

Literatures

1. Phylogenomics resolves the timing and pattern of insect evolution

2. Response to Comment on “Phylogenomics resolves the timing and pattern of insect evolution.”

T011091215

Info

Collection Records

Organ/Tissue

Brief Process

Map More Detail

RNA Extractions

Report

Usage

Sequencing

Library Construction

Library Process

Usage

Transcriptome Sequencing:

Raw Data

Statistics of Filtering

Raw Data

Result Data

Phylogenetic Analysis

1. Phylogenomics resolves the timing and pattern of insect evolution

2. Response to Comment on “Phylogenomics resolves the timing and pattern of insect evolution.”

Links

Database List

Contact Us